Institut NeuroPSI - UMR9197
CNRS Université Paris-Saclay
Gif-Sur-Yvette
France

Dr. Thomas DENEUX

Ingénieur de Recherche
Calcul Scientifique

thomas.deneux@-Code a retirer pour éviter le SPAM-cnrs.fr
3403, bureau 461
ORCID : 0000-0002-9330-7655 Twitter : @thomasdeneux

Hello I am Thomas Deneux

Article dans une revue

2019

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Sebastian Ceballo, Jacques Bourg, Alexandre Kempf, Zuzanna Piwkowska, Aurélie Daret, et al.. Cortical recruitment determines learning dynamics and strategy. Nature Communications, Nature Publishing Group, 2019, 10 (1), pp.1479. ⟨10.1038/s41467-019-09450-0⟩. ⟨hal-02193356⟩
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Thomas Deneux, Evan Harrell, Alexandre Kempf, Sebastian Ceballo, Anton Filipchuk, et al.. Context-dependent signaling of coincident auditory and visual events in primary visual cortex. eLife, eLife Sciences Publication, 2019, 8, ⟨10.7554/eLife.44006⟩. ⟨hal-02193361⟩
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2017

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Thomas Deneux, Timothée Masquelier, Maria Bermudez, Guillaume Masson, Gustavo Deco, et al.. Visual stimulation quenches global alpha range activity in awake primate V4: a case study.. Neurophotonics, Society of Photo-optical Instrumentation Engineers (SPIE), 2017, 4 (3), pp.031222. ⟨10.1117/1.NPh.4.3.031222⟩. ⟨hal-02329366⟩
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https://hal-amu.archives-ouvertes.fr/hal-02329366/file/NPh-004-031222.pdf BibTex
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Isabelle Ferezou, Thomas Deneux. Review: How do spontaneous and sensory-evoked activities interact?. Neurophotonics, Society of Photo-optical Instrumentation Engineers (SPIE), 2017, 4 (3), pp.031221. ⟨10.1117/1.NPh.4.3.031221⟩. ⟨hal-02061475⟩
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Benjamin Roland, Thomas Deneux, Kevin Franks, Brice Bathellier, Alexander Fleischmann. Odor identity coding by distributed ensembles of neurons in the mouse olfactory cortex. eLife, eLife Sciences Publication, 2017, 6, ⟨10.7554/eLife.26337⟩. ⟨hal-02062212⟩
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2016

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Thomas Deneux, Attila Kaszas, Gergely Szalay, Gergely Katona, Tamás Lakner, et al.. Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo. Nature Communications, Nature Publishing Group, 2016, pp.12190. ⟨10.1038/ncomms12190⟩. ⟨hal-01461648⟩
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https://hal.archives-ouvertes.fr/hal-01461648/file/Deneux_et_al_ncomms2016.pdf BibTex
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Thomas Deneux, Alexandre Kempf, Aurélie Daret, Emmanuel Ponsot, Brice Bathellier. Temporal asymmetries in auditory coding and perception reflect multi-layered nonlinearities. Nature Communications, Nature Publishing Group, 2016, ⟨10.1038/ncomms12682⟩. ⟨hal-01551876⟩
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https://hal.archives-ouvertes.fr/hal-01551876/file/ncomms12682.pdf BibTex

2012

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Thomas Deneux, Sylvain Takerkart, Amiram Grinvald, Guillaume Masson, Ivo Vanzetta. A processing work-flow for measuring erythrocytes velocity in extended vascular networks from wide field high-resolution optical imaging data. NeuroImage, Elsevier, 2012, 59 (3), pp.2569-2588. ⟨10.1016/j.neuroimage.2011.08.081⟩. ⟨hal-02387900⟩
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Thomas Deneux, Sylvain Takerkart, Amiram Grinvald, Guillaume Masson, Ivo Vanzetta. A processing work-flow for measuring erythrocytes velocity in extended vascular networks from wide field high-resolution optical imaging data. NeuroImage, Elsevier, 2012, 59 (3), pp.2569-2588. ⟨10.1016/j.neuroimage.2011.08.081⟩. ⟨hal-02329420⟩
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2011

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Thomas Deneux, Olivier Faugeras, Sylvain Takerkart, Guillaume Masson, Ivo Vanzetta. A new variational method for erythrocyte velocity estimation in wide-field imaging in-vivo. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2011, 30 (8), pp.1527--1545. ⟨10.1109/TMI.2011.2131151⟩. ⟨hal-00845723⟩
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Thomas Deneux, Olivier Faugeras, Sylvain Takerkart, Guillaume Masson, Ivo Vanzetta. A New Variational Method for Erythrocyte Velocity Estimation in Wide-Field Imaging In Vivo. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2011, 30 (8), pp.1527-1545. ⟨10.1109/TMI.2011.2131151⟩. ⟨hal-02387902⟩
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Communication dans un congrès

2014

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Brice Bathellier, Thomas Deneux, Louise François, Suncana Sikiric, Emmanuel Ponsot. Neuronal population correlate of asymmetric auditory perception in mice. Fifth Annual Meeting of the GDR Multielectrodes, Oct 2014, Gif sur Yvette, France. ⟨hal-01107135⟩
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2008

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Mickaël Péchaud, Ivo Venzetta, Thomas Deneux, Renaud Keriven. Sift-based sequence registration and flow-based cortical vessel segmentation applied to high resolution optical imaging data. 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, Paris, France. pp.720-723. ⟨hal-00835134⟩
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https://hal-enpc.archives-ouvertes.fr/hal-00835134/file/ISBI08.pdf BibTex

Rapport

2006

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Thomas Deneux, Ivo Vanzetta, Guillaume Masson, Olivier Faugeras. Cerebral blood flow recorded at high sensitivity in two dimensions using high resolution optical imaging. [Research Report] RR-5759, INRIA. 2006, pp.11. ⟨inria-00070261⟩
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https://hal.inria.fr/inria-00070261/file/RR-5759.pdf BibTex
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Thomas Deneux, Olivier Faugeras. Parameter estimation efficiency using nonlinear models in fMRI. [Research Report] RR-5758, INRIA. 2006, pp.35. ⟨inria-00070262⟩
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https://hal.inria.fr/inria-00070262/file/RR-5758.pdf BibTex

2005

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Thomas Deneux, Olivier Faugeras. EEG-fMRI fusion of non-triggered data using Kalman filtering. [Research Report] RR-5760, INRIA. 2005, pp.11. ⟨inria-00070260⟩
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https://hal.inria.fr/inria-00070260/file/RR-5760.ps.pdf BibTex

2004

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Olivier Faugeras, Geoffray Adde, Guillaume Charpiat, Christophe Chefd'Hotel, Maureen Clerc, et al.. Variational, Geometric and Statistical Methods for Modeling Brain Anatomy and Function. RR-5202, INRIA. 2004, pp.22. ⟨inria-00070790⟩
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https://hal.inria.fr/inria-00070790/file/RR-5202.pdf BibTex

Thèse

2006

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Thomas Deneux. Hemodynamic Models: Investigation and Application to Brain Imaging Analysis. Human-Computer Interaction [cs.HC]. Ecole Polytechnique X, 2006. English. ⟨tel-00457464⟩
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https://pastel.archives-ouvertes.fr/tel-00457464/file/deneux.pdf BibTex